How Inflammation in the Brain and Periphery Affects Brain Pathology in Common Dementias such as Alzheimer's Disease

Paramita Chakrabarty, PhD
University of Florida (Gainesville, FL, United States)
Year Awarded:
Grant Duration:
July 1, 2013 to June 30, 2016
Award Amount:
Grant Reference ID:
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Award Region:
US Southeastern

Co-principal Investigators

Naruhiko Sahara, PhD
University of Florida
This grant is made possible in part by a bequest from the Helen Veronica Coyne Trust.

Innate Immune System and Tauopathy


One of the most important factors that underlie degeneration of neurons in an Alzheimer's disease patient brain is massive inflammation. Inflammation is a natural reaction of the body to toxins, bacteria, and foreign particles. Cytokines are the messengers during inflammation and carry information between different cells. In the first part of the grant, using novel molecular biology techniques, the team of Drs. Chakrabarty and Sahara will try to understand whether the levels of cytokines and other related proteins are altered during the progressive development of abnormal brain changes in Alzheimer’s disease mouse models. Further, using different classes of cytokines in the brains of these mice, the team will explore whether one class of cytokines ('inflammatory') drive the disease and kill neurons in the process, whereas the opposing kind ('anti-inflammatory' cytokines) improves the disease and are protective.


Alzheimer’s disease and other dementias are marked by widespread activation of the innate immune system in the brain (the first line of defense against bacteria, viruses, or other toxic agents). However, it remains unclear whether this relentlessly progressing inflammatory signaling directly triggers the formation and accumulation of tau protein tangles that lead to synaptic deficits and nerve cell death. Dr. Chakrabarty’s laboratory is investigating how different inflammatory and anti-inflammatory cytokines affect tau proteins in mouse brains overexpressing the disease-associated human mutant tau. Such information will be vital in designing future therapeutics, based on immune modulating drugs that are aimed at blocking tau tangle formation and disease progression.

In the first part of the project, the team of Drs. Chakrabarty and Sahara will establish a progression of immune dysfunction in different tau mouse models of Alzheimer’s. The team will use new gene expressing profiling techniques to molecularly “barcode” different immune proteins in these mice, and then use conventional immunohistochemical techniques to measure the expression changes of a select set of proteins. This will allow them to infer whether upregulation of immune signaling precedes disease initiation and can act as a trigger of the disease process. More importantly, such studies can potentially yield a ‘gene signature pattern’ for future tau dementia theragnostics (tests or diagnostic markers that would identify patients who might benefit from a particular therapy).

In the second part of the project, the team of Drs. Chakrabarty and Sahara team will overexpress different inflammatory and anti-inflammatory cytokines in two different tau mouse models, in an effort to test how direct manipulation of the immune system alters tau pathology and neuronal health. Along with monitoring the progression of tau-associated disease by biochemical and histochemical (tissue- and cell-based) methods, the team will use other parameters to measure the outcome—for example, tests for motor and memory impairment in these mice. These studies will: a) enable an unprecedented measurement of the effects of manipulating multiple immune targets in multiple models of tau mice; and b) help to determine which therapies should be developed with high priority.

Finding an effective therapy for AD-type tauopathies is a major unmet medical need. Advances in understanding the root causes of tauopathies have not yet provided disease-modifying therapies that benefit patients suffering from these disorders. The results of this study could help to identify a good target for future treatment, with the potential to leverage existing anti-inflammatory therapies, potentially reducing the time it takes to go from the bench to the clinic. Drs. Chakrabarty and Sahara sincerely thank the BrightFocus Foundation and its partners in sharing our enthusiasm for this proposal.